RNA-seq

Analysis example: Expression comparison between two groups from RNA-seq data

Analysis image

Calculation of TPM for 6 samples and price for comparison between two groups

Lead QC + alignment + TPM calculation + optional test

2500 x 6 + 2500 x 6 + 3000 x 6 + 500 x 6 = 51000 yen

Data you send

・Short read fastq/fasta files

・Reference genome sequence fasta file

・Gene annotation gff3/gtf file corresponding to the reference genome (If not, can be created as an option)

Delivery data

・Read quality data (average read length, number of reads, etc.)

・Alignment results (average depth, genome coverage)

・bam file

・TPM value list for each gene

・List of statistical processing results

* We can also create files in your desired format and analyze options.

deadline

About 2 weeks after starting QC

Other analysis and reference price list

*Price includes lead QC and alignment. It varies depending on format changes and parsing options.

In addition to the above, we will accept requests for analysis as much as possible.

Please use the inquiry column for estimates and consultations.