Genome sequence analysis

Analysis example: Calling SNPs to identify locations where CAPS markers can be designed

Analysis image

Price per sample

Read QC + alignment + SNP calls + CAPS possible SNP calls

2500 + 2500 _cc781905-5cde- 3194-bb3b-136bad5cf58d_ + 3000 _cc781905-5cde-3194-bb3b -136bad5cf58d_ + _cc781905- 5cde-3194-bb3b-136bad5cf58d_1000 = _cc781905-5cde-3194- bb3b-136bad5cf58d_ 9000 Yen

Data you send

・Short read fastq/fasta files

・Reference genome sequence fasta file

Delivery data

・Read quality data (average read length, number of reads, etc.)

・Alignment results (average depth, genome coverage)

・bam file

・List of called SNPs

・List of SNPs that can be converted into CAPS markers

* We can also create files in your desired format and analyze options.

deadline

About 2 weeks after starting QC

Other analysis and reference price list

*Price includes lead QC and alignment. It varies depending on format changes and parsing options.

In addition to the above, we will accept requests for analysis such as long lead analysis as much as possible.

Genome sequence analysis

Please use the inquiry column for estimates and consultations.